Abstract

EDTA whole blood samples were collected from 281 unrelated individuals of Han population living in Wuhan, China. DNA was extracted using Cheles-100 method (1). Hot-start PCR was performed in a total volume of 10 µL containing 10 ng genomic DNA, 0.2 µM each primer, 10 mM Tris-HCl buffer (pH8.3), 50 mM KCl, 1.5 mM MgCl2, 200 µM each dNTP, and 0.3 U Taq DNA polymerase (BioStar, Canada) was add when the temperature reaches 92°C. The primer sequences newly designed by us were: Penta D: 5'-cagagcaagacaccatctcaa-3', 5'-tttgcctaacctatggtcataacg-3'; Penta E: 5'-agatcacgccattgcactcc-3', 5'-gggttattaattgagaaaactccttacaat-3'. PCR cycling conditions: 95°C for 2 min soak, 32 cycles of 30 s at 94°C, 30 s at 62°C for Penta D and 60°C for Penta E, 35 s at 72°C followed by a 5 min extension period at 72°C. The amplification products were separated in a vertical, native polyacrylamide gel (6% T; 5% C) and visualized by silver staining (2). Allele frequencies and other statistics parameters for forensic and paternity were determined for these two locus by the PowerStats software packages (3). The Hardy-Weinberg equilibrium test (HWE) was performed by an exact test (4). None of the analyzed loci showed deviations from HWE (P > 0.05) in the population studied.

References

1.
Walsh
PS
,
Metzger
DA
,
Higuchi
R
.
Chelex 100 as a medium for simple extraction of DNA for PCR-based typing from forensic material
.
Biotechniques
 0736-6205
1991
;
10
:
506
13
.
2.
Bassam
BJ
,
Caetano-Anolles
G
,
Gresshoff
PM
.
Fast and sensitive silver staining of DNA in polyacrylamide gels
.
Anal Biochem
 0003-2697
1991
;
196
:
80
3
.
3.
PowerStatsV12.xls software
. Free program distributed by Promega Corporation. From http://www.promega.com/geneticidtools/powerstats
4.
Guo
SW
,
Thompson
EA
.
Performing the exact test of Hardy-Weinberg proportion for multiple alleles
.
Biometrics
 0006-341X
1992
;
48
:
361
72
.
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